Alignment of human a-TTP, human CRALBP, human TAP, PTPase-MEG2, and Sec14p

This alignment was made using the MULTALIN server at the PBIL in Lyon, France. The default settings for sequence comparison were accepted without revision.


                       10        20        30        40        50        60
                        |         |         |         |         |         |
aTTP_32kDa     ------------------------------------------MAEARSQPSAGPQLNALP
CRALBP_human   MSEGVGTFRMVPEEEQELRAQLEQLTTKDHGPVFGPCSQLPRHTLQKAKDELNEREETRE
TAP_45kDa      -------------------------------------------------------MSGRV
PTPASE_MEG2    ---------------------------------------------MEPATAP---RPDMA
Sec14p         -------------------------------------QQEKEFLESYPQNCPPDALPGTP
Consensus                                                                  
Prim.cons.     MSEGVGTFRMVPEEEQELRAQLEQLTTKDHGPVFGPC2Q22233E44PQ44P333LPGRP

                       70        80        90       100       110       120
                        |         |         |         |         |         |
aTTP_32kDa     DHSPLLQPGLAALRRRAREAGVPLAPL--PLTDSFLLRFLRARDFDLDLAWRLLKNYYKW
CRALBP_human   EAVRELQEMVQAQAASGEELAVAVAERVQEKDSGFFLRFIRARKFNVGRAYELLRGYVNF
TAP_45kDa      GDLSPRQKEALAKFRENVQD-V-LPALPNPDDYFL-LRWLRARSFDLQKSEAMLRKHVEF
PTPASE_MEG2    PELTPEEEQATKQFLEEINKWT-VQYNVSPLSWNVAVKFLMARKFDVLRAIELFHSYRET
Sec14p         GNLDSAQEKALAELRKLLED----AGFIERLDDSTLLRFLRARKFDVQLAKEMFENCEKW
Consensus        l   #e a a  r   #  v  a    pld    lrflrARkF#v  a e$l  y   
Prim.cons.     G5L5PLQE5ALAQFRE55ED3V22A5LV4PLDDSFLLRFLRARKFDVQ2A5ELLRNYV22

                      130       140       150       160       170       180
                        |         |         |         |         |         |
aTTP_32kDa     RAEC-------------PEISADLHPRSIIGLLKAGYHGVLRSRDPTGSKVLIYRIAHWD
CRALBP_human   RLQY-------------PELFDSLSPEAVRCTIEAGYPGVLSSRDKYGRVVMLFNIENWQ
TAP_45kDa      RKQKDIDNIIS---WQPPEVIQQYLSGGMCGYDLDGCPVWYDIIGPLDAKGLLFSASKQD
PTPASE_MEG2    RRKEGIVKLKP---HEEP-LRSEILSGKF---------TILNVRDPTGASIALFTARLHH
Sec14p         RKDYGTDTILQDFHYDEKPLIAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEER
Consensus      R                pel     p         g p  l  rdp g    lf      
Prim.cons.     RKQYGID3I33DFH33EPELIA5LLPG554GTDK2GYP2VL5SRDPTGAKV2LF52S5WD

                      190       200       210       220       230       240
                        |         |         |         |         |         |
aTTP_32kDa     PKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIAAVL
CRALBP_human   SQEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQQAASLRTSDLRKMVDML
TAP_45kDa      LLRTKMREC-ELLLQECAHQTTKLGRKVETITIIYDCEGLGLKHLWKPAVEAYGEFLCMF
PTPASE_MEG2    PHKSVQHVVLQALFYLLDRAVDSFETQRNGLVFIYDMCGSNYANF---ELDLGKKVLNLL
Sec14p         MLKNLVWEYESVVQYRLPACSRAAGHLVETSCTIMDLKGISISSAYS-VMSYVREASYIS
Consensus             e        l       etq #g   I #  G     a     s   k    l
Prim.cons.     PLK5T55EVLQ2LLY5LE55V555ETQ2NGICIIYDL2G555SHA4S355S552K5L5ML

                      250       260       270       280       290       300
                        |         |         |         |         |         |
aTTP_32kDa     TDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFP-DILP
CRALBP_human   QDSFPARFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDDLSGFYQEIDE-NILP
TAP_45kDa      EENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGANWKEVLLKHISPDQVP
PTPASE_MEG2    KGAFPARLKKVLIVGAPIWFRVPYSIISLLLKDKVRERIQILKTS---EVTQHLPRECLP
Sec14p         QNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLP
Consensus         %P r k    ! aP  F   %  ikpfL  k  er!  lg      ll h p # lP
Prim.cons.     QDSFP2RLKKIHIINAP55F52AY2LIKPFLKEKTRERIF2LG52YK4ELL2HIP32ILP

                      310       320       330       340       350       360
                        |         |         |         |         |         |
aTTP_32kDa     LEYGG--EEFSMEDICQEWTNFIMKSEDYLSSISESIQ----------------------
CRALBP_human   SDFGG--TLPKYDGKAVAEQLFGPQAQAENTAF---------------------------
TAP_45kDa      VEYGGTMTDP--DGNPKCKSKINYGGDIPRKYYVRDQVKQQYEHSVQISRGSSHQVEYEI
PTPASE_MEG2    ENLGGYVKIDLATWNFQFLPQVNGHPDPFDEIILFSLPPALDWDSVHVPGPHAMTIQELV
Sec14p         VKFGGKSEVDESKGGL-YLSDIGPWRDPKYIGPEGEAPE---------------------
Consensus         GG        g            #                                 
Prim.cons.     VE2GG3325244DGN5Q5LS522P55DP5555I44S4P322222SV22222222222222

                      370       380       390       400       410       420
                        |         |         |         |         |         |
aTTP_32kDa     ------------------------------------------------------------
CRALBP_human   ------------------------------------------------------------
TAP_45kDa      LFPGCVLRWQFMSDGADVG----FGIFLKTKMGERQRAGEMTEVLPNQRYNSHLVPEDG-
PTPASE_MEG2    DYVNARQKQGIYEEYEDIRRENPVGTFHCSMSPGNLEKNRYGDVPCLDQTRVKLTKRSGH
Sec14p         ------------------------------------------------------------
Consensus                                                                  
Prim.cons.     2222222222222222D22RENP2G2F2222222222222222V222222222L2222GH

                      430       440       450       460       470       480
                        |         |         |         |         |         |
aTTP_32kDa     ------------------------------------------------------------
CRALBP_human   ------------------------------------------------------------
TAP_45kDa      TLTCSDPGIYVLRFDNTYSFIHAKKVNFTVEVLLPDKASEEKMKQLGAGTPK--------
PTPASE_MEG2    TQTDYINASFMDGYKQKNAYIGTQGPLENTYRDFWLMVWEQKVLVIVMTTRFEEGGRRKC
Sec14p         ------------------------------------------------------------
Consensus                                                                  
Prim.cons.     T2T22222222222222222I222222222222222222E2K2222222T22EEGGRRKC

                      490       500       510       520       530       540
                        |         |         |         |         |         |
aTTP_32kDa     ------------------------------------------------------------
CRALBP_human   ------------------------------------------------------------
TAP_45kDa      ------------------------------------------------------------
PTPASE_MEG2    GQYWPLEKDSRIRFGFLTVTNLGVENMNHYKKTTLEIHNTEERQKRQVTHFQFLSWPDYG
Sec14p         ------------------------------------------------------------
Consensus                                                                  
Prim.cons.     GQYWPLEKDSRIRFGFLTVTNLGVENMNHYKKTTLEIHNTEERQKRQVTHFQFLSWPDYG

                      550       560       570       580       590       600
                        |         |         |         |         |         |
aTTP_32kDa     ------------------------------------------------------------
CRALBP_human   ------------------------------------------------------------
TAP_45kDa      ------------------------------------------------------------
PTPASE_MEG2    VPSSAASLIDFLRVVRNQQSLAVSNMGARSKGQCPEPPIVVHCSAGIGRTGTFCSLDICL
Sec14p         ------------------------------------------------------------
Consensus                                                                  
Prim.cons.     VPSSAASLIDFLRVVRNQQSLAVSNMGARSKGQCPEPPIVVHCSAGIGRTGTFCSLDICL

                      610       620       630       640       650       660
                        |         |         |         |         |         |
aTTP_32kDa     ------------------------------------------------------------
CRALBP_human   ------------------------------------------------------------
TAP_45kDa      ------------------------------------------------------------
PTPASE_MEG2    AQLEELGTLNVFQTVSRMRTQRAFSIQTPEQYYFCYKAILEFAEKEGMVSSGQNLLAVES
Sec14p         ------------------------------------------------------------
Consensus                                                                  
Prim.cons.     AQLEELGTLNVFQTVSRMRTQRAFSIQTPEQYYFCYKAILEFAEKEGMVSSGQNLLAVES

               
               
aTTP_32kDa     -
CRALBP_human   -
TAP_45kDa      -
PTPASE_MEG2    Q
Sec14p         -
Consensus                                                                  
Prim.cons.     Q                                                           


Alignment data :
Alignment length : 661
Residues conserved for 90 % or more (upper-case letters) : 13 is 1.97 %
Residues conserved for 50 % and less than 90 % (lower-case letters) : 62 is 9.38 %
Residues conserved less than 50 % (white space) : 574 is 86.84 %
IV conserved positions (!) : 2 is 0.30 %
LM conserved positions ($) : 1 is 0.15 %
FY conserved positions (%) : 2 is 0.30 %
NDQEBZ conserved positions (#): 7 is 1.06 %
Sequence 0001 : aTTP_32kDa ( 278 residues).
Sequence 0002 : CRALBP_human ( 317 residues).
Sequence 0003 : TAP_45kDa ( 403 residues).
Sequence 0004 : PTPASE_MEG2 ( 593 residues).
Sequence 0005 : Sec14p ( 296 residues).

MULTALIN options used :
c=blosum62
g=12
k1=90
k2=50
l=2
order=optA
s=abs