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Department of Chemistry - Brock University
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Jeffrey K. Atkinson: Useful Links

Graphics

  • RasMol Eric Martz's excellent page devotd to this biomolecular viewer and its many uses including chime (below)
  • Swiss-PdbViewerPowerful 3D-protein structure viewer and analysis
  • Chemscape Chime from MDL Information Systems Inc, is required to view Java supported molecular presentations.
  • Databases

    Macromolecule Sequences and Structures

  • Bioinformatics Supercomputing Centre (BiSC) Collection of Genome Database (GDB), sequence and structure prediction services at Toronto's Hospital for Sick Children
  • Biomer(Now called simply B), B is a Java-based, on-line biomolecular modeling package
  • European Molecular Biology Laboratory (EMBL) This inlcudes such services as BLAST, 3D ALI, Clustal W, DNA and protein sequence searches
  • KlothoBiochemical Compounds Declarative Database
  • ModBaseA database of three-dimensional protein models calculated by comparative modeling
  • National Centre for Biotechnology Information (NCBI)
  • PubMed
  • Nucleic Acids Database (NDB) Biological Structure Resource for nucleic acids and protein-nucleic acid complexes
  • ProDomA Protein Domain Database
  • Protein Sequence Analysis (PSA) predicts probable secondary structures and folding classes for a given amino acid sequence.
  • RCSB Protein Data Bank
  • Swiss ModelAn Automated Comparative Protein Modelling Server
  • Swiss PROT Annotated Protein Sequence Database
  • Chemistry

  • CAS, SciFInder, STN Easy, etc
  • Societies and Associations

  • American Chemical Society
  • Organic Chemistry Division
    Medicinal Chemistry Division
    Biological Chemistry Division
  • Canadian Society for Chemistry
  • FASEBFederation of American Societies for Experimental Biology